Morgane Thomas-Chollier - Ecole Normale Supérieure ENS - October 2015
Bioinformatic analyses of cis-regulatory motifs
Exercise 1: Motif descriptors
Constructing a personal matrix
Obtaining a matrix from a database
Exercise 2: String-based pattern matching
Search for a motif described as a consensus sequence
Estimating the amount of false positives
Exercise 3: Matrix-based pattern matching
Search for a motif described as a matrix
Estimating the amount of false positives
Morgane Thomas-Chollier - Ecole Normale Supérieure mthomas[at]biologie.ens.fr
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