Selected publications

This page lists the main recent publications of the EEM unit. A more complete list is available on each of the personal pages.

 Enard D, Depaulis F, Roest Crolluis, (In press) Human and non-human primate genomes share hotspots of positive selection. PLoS Genetics.

 Lambert, A. (2010). Population genetics, ecology and the size of populations. J. Math. Biol. 60 469-472. (abstract)

 E Edeline, TO Haugen, FA Weltzien, D Claessen, IJ Winfield, NC Stenseth and LA Vollestad. (2009). Body downsizing caused by non-consumptive social stress severely depresses population growth rate. Proceedings of the Royal Society B (abstract)

 Ballesteros, S., Vergu, E. & Cazelles, B., (2009). Influenza A gradual and epochal evolution : insights from simple models. PLoS One, 4, e7426. (abstract)

 Depaulis F, Orlando L, Hanni C, (2009) Using classical population genetics tools with heterochroneous data: time matters! PLoS One 4, e5541. (abstract)

 Zhang, Z., Cazelles, B., Tian, H., Stige, L.C., Bräuning, A. and Stenseth, N.C., (2009). Periodic Temperature-Associated Drought/Flood Drives Locust Plagues in China. Proc. Royal Soc. London B, 276, 823-831. (abstract)

 Lazzaro X, G Lacroix, B Gauzens, J Gignoux & S Legendre. (2009). Predator foraging behaviour drives food-web topological structure. Journal of Animal Ecology, 78: 1307-1317. (abstract)

 Aguilee, R., D. Claessen and A. Lambert. (2009). Allele fixation in a dynamic metapopulation: founder effects vs refuge effects. Theoretical Population Biology 76, 105-117. (abstract)

 Demetrius L, S Legendre & P Harremöes. (2009). Evolutionary entropy: A predictor of body size, metabolic rate and maximal life span. Bulletin of Mathematical Biology 71, 800-818. (abstract)

 Legendre S. (2009). The number of crossings in a regular drawing of the complete bipartite graph. Journal of Integer Sequences, Vol. 12, article 09.5.5. (abstract)

 Claessen, D., A. de Vos and A.M. de Roos. (2009). Bioenergetics, overcompensation and the source/sink status of marine reserves. Canadian Journal of Fisheries and Aquatic and Sciences, 66, 1059-1071. (abstract)

 Cattiaux, P., Collet, P., Lambert, A., Martinez, S., Méléard, S., San Martin, J. (2009). Quasi-stationary distributions and diffusion models in population dynamics. Ann. Probab. 37 1926-1969. (abstract)

 Caballero, M.E., Lambert, A., Uribe Bravo, G. (2009). Proof(s) of the Lamperti representation of continuous-state branching processes. Probab. Surveys 6 62-89. (abstract)

 Kausrud, K.L., Mysterud, A., Steen, H., Vik, J.O., Østbye, E., Cazelles, B., Framstad, E., Eikeset, A.M., Mysterud, I., Solhøy, T. and Stenseth, N.C., (2008). Linking climate change to lemming cycles. Nature, 456, 93-98. (abstract)

 Pascual, M., Cazelles, B., Bouma, M., Chaves, L. and Koelle, K., (2008). Shifting patterns : malaria dynamics and rainfall variability in an African highland. Proc. Royal Soc. London B, 275, 123-132. (abstract)

 Raquin, A.L., F. Depaulis, A. Lambert, N. Galic, P. Brabant and I. Goldringer (2008). Experimental estimation of mutation rates in a wheat population with a gene genealogy approach. Genetics 179 2195-2211. (abstract)

 Chapron G, DG Miquelle, A Lambert, JM Goodrich, S Legendre & J Clobert. (2008). The impact on tigers of poaching versus prey depletion. Journal of Applied Ecology 45, 1667-1674. (abstract)

 Cazelles, B., Chavez, M., Berteaux, D., Ménard, F., Vik, J.O, Jenouvrier, S. and Stenseth, N.C., (2008). Wavelet analysis of ecological time series. Oecologia, 156, 287-304. (abstract)

 Lambert, A. (2008) Population Dynamics and Random Genealogies. Stoch. Models 24 45-163. (abstract)

 S. Legendre, T.W. Schoener, J. Clobert & D.A. Spiller. (2008). How is extinction risk related to population-size variability over time? A family of models for species with repeated extinction and immigration. The American Naturalist, 172, 282-298. (abstract)

 D. Claessen, J. Andersson, L. Persson and A.M. de Roos. (2008). The effect of population size and recombination on delayed evolution of polymorphism and speciation in sexual populations. The American Naturalist, 172, E18-E34. (abstract)

 Lambert, A. 2008 The allelic partition for coalescent point processes. Markov Proc. Relat. Fields., 15, 359-386. (abstract)

 Pascual, M., Cazelles, B., Bouma, M., Chaves, L. & Koelle, K., 2008. Shifting patterns: malaria dynamics and rainfall variability in an African highland. Proc. Royal Soc. London B, 275, 123-132. (abstract)

 S. Lion and M. van Baalen 2008. Self-structuring in spatial evolutionary ecology. Ecol. Lett. 11:277-295. (abstract)

 S. Legendre. 2008. La séparation en biologie. In De la Séparation, directed by C Schaeffer, L’Harmattan, Paris, pp. 55-71. (abstract)

 Gonzalez, A., Lambert, A., Ricciardi, A. 2008 When does ecosystem engineering facilitate invasion? Oikos, 117: 1247-1257 (abstract)

 Lambert, A. (2007) Quasistationary distributions and the continuous-state branching process conditioned to be never extinct. Elec. J. Prob. 12 420-446. (abstract)

 Champagnat, N., Lambert, A. 2007 Evolution of discrete populations and the canonical diffusion of adaptive dynamics. Ann. Appl. Prob. 17 102-155. (abstract)

 S. Kéfi, M. Rietkerk, M. van Baalen & M. Loreau. 2007. Local facilitation and transitions in arid ecosystems. Theor. Popul. Biol. 71: 367-379 . (abstract)

 S. De Monte, F. d’Ovidio, S. Danø and P. G. Sørensen. 2007. Dynamical quorum sensing: Population density encoded in cellular dynamics. PNAS 104, 18377. (abstract)

 D. Claessen, J. Andersson, L. Persson and A.M. de Roos. 2007. Delayed evolutionary branching in small populations. Evolutionary Ecology Research 9(1): 51-69 (abstract)

 M. van Baalen & M. Beekman. 2006. The costs and benefits of genetic heterogeneity in resistance against parasites in social insects. Am. Nat. 167:568-577. (abstract)

 Cazelles, B. & Hales, S., 2006. Infectious diseases, climate influences and Nonstationary. PLoS Medicine, 3, 1212-1213 (e328). (abstract)

 Lambert, A. 2006 Probability of fixation under weak selection: a branching process unifying approach. Theoret. Pop. Biol. 69 419-441. (abstract)

 V.A.A. Jansen & M. van Baalen 2006. Altruism through beard chromodynamics. Nature (London). Nature (Lond) 440:663-666. (abstract)

 D. Claessen, C.A. Gilligan, P.J.W. Lutman and F. van den Bosch. 2005. Which traits promote persistence of feral GM crops? Part 1: implications of environmental stochasticity. Oikos 110 (1): 20-29. (abstract)

 S. Alizon & M. van Baalen. 2005. Emergence of a convex trade-off between transmission and virulence. Am. Nat. 165: E155-167. (abstract)

 Lambert, A. 2005 The branching process with logistic growth. Ann. Appl. Prob. 15 1506-1535. (abstract)

 Cazelles, B., Chavez, M., McMichael, A.J. & Hales, S., 2005. Nonstationary influence of El Niño on the synchronous dengue epidemics in Thailand. PLoS Medicine, 2, 313-318 (e106). (abstract)

 D. Claessen 2005. Alternative life-history pathways and the elasticity of stochastic matrix models. American Naturalist 165: E27-E35. (abstract)

 S. De Monte, F. d’Ovidio, H. Chaté, E. Mosekilde. 2004. Noise-induced macroscopic bifurcations in globally coupled chaotic units. Phys. Rev. Lett. 92, 254101 (abstract)

 Cazelles, B., 2004. Symbolic dynamics for identifying similarity between rhythms of ecological time series. Ecol. Lett., 7, 755-763. (abstract)

 S. Legendre. 2004. Influence of age structure and mating system on population viability. In Evolutionary Conservation Biology (R. Ferrière, U. Dieckmann & D. Couvet eds.), Cambridge University Press, pp. 41-58. (abstract)

 Klvana, I., Berteaux, D. & Cazelles, B., 2004. Porcupine feeding scars and climatic data show ecosystem effects of the solar cycle. Am. Nat., 164, 283-297. (abstract)

 C. Bessa-Gomes, S. Legendre & J. Clobert. 2004. Allee effects, mating systems and the extinction risk in populations with two sexes. Ecology Letters 7:802-812. (abstract)

 Depaulis F, Mousset S, Veuille M. Power of neutrality tests to detect bottlenecks and hitchhiking. J Mol Evol. 2003;57 Suppl 1:S190-200. (abstract)

 Baudry E, Depaulis F. 2003. Effect of misoriented sites on neutrality tests with outgroup. Genetics. Nov;165(3):1619-22. (abstract)

 S. De Monte, F. d’Ovidio, E. Mosekilde. 2003. Coherent regimes of globally coupled dynamical systems. Phys. Rev. Lett. 90, 054102(1-4) (abstract)

 C. Hauert, S. De Monte, J. Hofbauer, K. Sigmund. 2002. Volunteering as red queen mechanism for cooperation in public goods games. Science 296, 1129-1132 (abstract)

 D. Claessen, U. Dieckmann. 2002. Ontogenetic niche shifts and evolutionary branching in size-structured populations. Evolutionary Ecology Research 4 (2): 189-217. (abstract)

 Depaulis F, Mousset S, Veuille M. Haplotype tests using coalescent simulations conditional on the number of segregating sites. Mol Biol Evol. 2001 Jun;18(6):1136-8. (abstract)

 A.P. Møller & S. Legendre. 2001. Allee effect, sexual selection and demographic stochasticity. Oikos 92:27-34. (abstract)

 Depaulis F, Brazier L, Veuille M. Selective sweep at the Drosophila melanogaster Suppressor of Hairless locus and its association with the In(2L)t inversion polymorphism. Genetics. 1999 Jul;152(3):1017-24. (abstract)

 Depaulis F, Veuille M. Neutrality tests based on the distribution of haplotypes under an infinite-site model. Mol Biol Evol. 1998 Dec;15(12):1788-90. (abstract)